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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886753.1_cds_XP_016440912.1_36326
CDS Infomation

[gene=LOC107766615] [db_xref=GeneID:107766615] [protein=ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like] [protein_id=XP_016440912.1] [location=complement(join(53588..53671,53750..53932,54165..54226,54773..54884,55145..55207,56267..56371,56481..56684,56813..56928,57748..57976))] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTTGCTTCTCTCTCCGCTTTCTAGCTCGACGGTTACTGAAAATCGCGAG
CTGGGTTCTGGTAAATCAACTTTCATATCCAGTCCCAATTTCTCCTTTGCAACTTCTGTT
CACAGTTGCAGGCCAAACGGCGTTCGAGGTTATTGTTACAGGTCTCCGGTAGCTAAGTCT
TTGGACCATATACCCCAAAAATTCAGACTGGAAAATCTCAAAGATGGACTACTGGACAAC
TATAAAAGTGCCCCTCAGTATCTTTACGGCCTTAGTCCTTCACAGATGGATATGTTCATG
ACAGAAGATAACCCAGTACGGCGACAGTCAGAAAGTGTCACTGAGGATAGTATATCTTCA
GCCAATAACTATCTGAGCAATGGTGGAATGTGGAGTATGTCCGGCATGAACGATCGGGGC
CCCTCGAAATACAGTATGAGTGTCAGCATGTACCGTGGAGGAGCAAGAGGATCTGGAAGA
CCTCGAACTGCGCCTCCTGATTTGCCATCTTTGCTTTTGGATGCTCGAATTGTCTATCTG
GGCATGCCTATTGTACCAGCTGTTACAGAGCTTCTTGTTGCTCAGTTTATGTGGTTGGAT
TATGACAATCCATCAAAGCCTATATACCTATATATAAACTCATCAGGCACACAGAATGAG
AAGATGGAGACTGTTGGGTCTGAAACAGAGGCATATGCCATCGCTGACACAATGGCATAC
TGCAAATCAGATATCTATACAGTGAACTGTGGCATGGCATATGGTCAAGCAGCAATGCTT
CTGTCACTGGGAAAGAAGGGGTTCCGTGCTATGCAGCCAAATTCATCTACAAAATTGTAT
TTACCTAAAGTCAGCAAATCCAGTGGAGCAGTGATAGATATGTGGATCAAGGCCAAAGAA
CTAGATGCAAACACTGAGTATTACCTTGAACTATTAGCGAAAGGAATTGGAAAACCAAAG
GAAGAAATCGAGAAAGATATTCAACGCCCTAAATATCTGCGGGCACAAGAAGCCATTGAC
TATGGCATTGCGGACAAGATAATCGATTCAAGAGACAATGCATTTGAGAAAAGGAACTAT
GATGAGATACTCGCCCAATCTAGAGCTATGAGGAAAGCCGGACCAGGTGCTCAGGCTGCT
CCATCTGGCTTCAGGTGA

Peptide Sequence

PEP ID

XP_016440912.1
PEP Infomation

PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MASSLLLSPLSSSTVTENRELGSGKSTFISSPNFSFATSVHSCRPNGVRGYCYRSPVAKS
LDHIPQKFRLENLKDGLLDNYKSAPQYLYGLSPSQMDMFMTEDNPVRRQSESVTEDSISS
ANNYLSNGGMWSMSGMNDRGPSKYSMSVSMYRGGARGSGRPRTAPPDLPSLLLDARIVYL
GMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADTMAY
CKSDIYTVNCGMAYGQAAMLLSLGKKGFRAMQPNSSTKLYLPKVSKSSGAVIDMWIKAKE
LDANTEYYLELLAKGIGKPKEEIEKDIQRPKYLRAQEAIDYGIADKIIDSRDNAFEKRNY
DEILAQSRAMRKAGPGAQAAPSGFR

Transcript Sequence

Gene sequence data has not been registered.